@incollection{, 8EDAAB19910CFC01F1F44350FFE91862 , author={{Prof G V PadmaRaju} and {SRKR ENGINEERING COLLEGE AFFILIATED TO ANDHRA UNIVERSITY}}, journal={{Global Journal of Computer Science and Technology}}, journal={{GJCST}}0975-41720975-435010.34257/gjcst, address={Cambridge, United States}, publisher={Global Journals Organisation}1432339 } @incollection{b0, , title={{Mixture Model Analysis of DNA Microarray Images}} , author={{ KBlekas } and { Member } and { NPIeee } and { SeniorGalatsanos } and { Member } and { AIeee } and { SeniorLikas } and { Member } and { IEIeee } and { Lagaris }} , journal={{IEEE TRANSACTIONS ON MEDICAL IMAGING}} 24 7 , year={JULY 2005} } @incollection{b1, , title={{Identifying Significant Genes from Microarray Data}} , author={{ Han-YuChuang } and { HongfangLiu } and { StuartBrown } and { CameronMcmunn-Coffran } and { Cheng-YanKao } and { D. FrankHsu }} , booktitle={{Proceedings of the Fourth IEEE Symposium on Bioinformatics and Bioengineering}} the Fourth IEEE Symposium on Bioinformatics and Bioengineering , year={2004} } @book{b2, , title={{an unsupervised artifact correction approach for the analysis of dna microarray images}} , author={{ KBlekas } and { PNikolas } and { Galatsanos } and { Georgiou }} , year={2003} , publisher={IEEE} } @incollection{b3, , title={{towards automatic analysis of DNA microarrays}} , author={{ ChristianUehara } and { IoannisKakadiaris }} , booktitle={{Proceedings of WACV}} WACV , year={2002} } @incollection{b4, , title={{Dimension Reduction of Microarray Data Based on Local Tangent Space Alignment}} , author={{ LiTeng } and { HongyuLi } and { XupingFu } and { WenbinChen } and { I-FanShen }} , journal={{IEEE}} , year={2005} } @incollection{b5, , title={{Normalization of Microarray Data by Iterative Nonlinear Regression}} , author={{ JianhuaXuan } and { EricHoffman } and { RobertClarke } and { YueWang }} , booktitle={{IEEE conference on IBBE}} , year={2005} } @incollection{b6, , title={{Business Objects as Part of a Preprocessing based Micro Array Data Analysis}} , author={{ PFDietmar } and { Moeller }} , journal={{IEEE conference on EIT}} , year={2005} } @incollection{b7, , title={{Recursive Feature Addition for Gene Selection}} , author={{ QingzhongLiu } and { StudentMember } and { AndrewHIeee } and { Sung }} , journal={{IEEE conference on Nueral network}} , year={2006} } @incollection{b8, , title={{IntClust: A Software Package for Clustering Replicated Microarray Data}} , author={{ WeiPeng } and { TaoLi }} , booktitle={{IEEE conference on BIBE}} , year={2006} } @incollection{b9, , title={{Interactive Semisupervised Learning for Microarray Analysis}} , author={{ YijuanLu } and { QiTian } and { FengLiu } and { MaribelSanchez } and { YufengWang }} , journal={{ieee/acm transactions on computational biology and bioinformatics}} 4 2 , year={april-june 2007} } @incollection{b10, , title={{Poisson-Based Self-Organizing Feature Maps and Hierarchical Clustering for Serial Analysis of Gene Expression Data}} , author={{ HaiyingWang } and { HuiruZheng } and { FranciscoAzuaje }} , journal={{IEEE/ACM Transactions on Computational Biology and Bioinformatics}} 4 , year={April 2007} } @incollection{b11, , title={{Finding a Common Motif of RNA Sequences Using Genetic Programming: The GeRNAMo System}} , author={{ ShaharMichal } and { TorIvry } and { OmerSchalit-Cohen } and { MosheSipper } and { DannyBarash }} , journal={{IEEE/ACM transactions on computational biology and bioinformatics}} 4 4 , year={2007} } @incollection{b12, , title={{Data-Dependent Kernel Machines for Microarray Data Classification}} , author={{ HuilinXiong } and { YaZhang } and { Xue-WenChen }} , journal={{IEEE/ACM transactions on computational biology and bioinformatics}} 4 4 , year={2007} } @incollection{b13, , title={{Inferring Gene Regulatory Networks Using Differential Evolution with Local Search Heuristics}} , author={{ NasimulNoman } and { HitoshiIba }} , journal={{IEEE/ACM transactions on computational biology and bioinformatics}} 4 4 , year={2007} } @incollection{b14, , title={{Incorporating Gene Functions into Regression Analysis of DNA-Protein Binding Data and Gene Expression Data to Construct Transcriptional Networks}} , author={{ PengWei } and { WeiPan }} , journal={{IEEE/ACM transactions on computational biology and bioinformatics}} 5 3 , year={2008} } @incollection{b15, , title={{A Review of Feature Selection Techniques in Bioinformatics}} , author={{ YSaeys } and { IInza } and { PLarran? }} , journal={{Bioinformatics}} 23 19 , year={2007} } @incollection{b16, , title={{}} , author={{ PYang }} , journal={{A Review of Ensemble Methods in Bioinformatics}} 5 4 , year={2010} , note={Current Bioinformatics} } @incollection{b17, , title={{An Introduction to Variable and Feature Selection}} , author={{ IGuyon }} , journal={{J. Machine Learning Research}} 3 , year={2003} } @incollection{b18, , author={{ A.-CHaury } and { PGestraud } and { J.-PVert }} , booktitle={{The Influence of Feature Selection Methods on Accuracy, Stability and Interpretability of Molecular Signatures}} , year={2011} 6 e28210 } @incollection{b19, , title={{Gene Selection for Cancer Classification Using Support Vector Machines}} , author={{ IGuyon }} , booktitle={{Machine Learning}} , year={2002} 46 } @incollection{b20, , title={{On the Consistency of Feature Selection Using Greedy Least Squares Regression}} , author={{ TZhang }} , journal={{J. Machine Learning Research}} 10 , year={2009} } @incollection{b21, , title={{}} , author={{ S.-HCha }} , journal={{Comprehensive Survey on}} } @incollection{b22, , booktitle={{Distance/Similarity Measures Between Probability Density Functions}} , year={2007} 1 } @book{b23, , title={{A Comparison of Fold-Change and the t-Statistic for Microarray Data Analysis}} , author={{ DWitten } and { RTibshirani }} , year={2007} Stanford Univ. , note={technical report} } @incollection{b24, , title={{On Estimation of a Probability Density Function and Mode}} , author={{ EParzen }} , journal={{The Annals of Math. Statistics}} 33 3 , year={1962} } @incollection{b25, , title={{Gene Selection for Cancer Classification through Ensemble of Methods}} , author={{ AWilinski } and { SOsowski } and { KSiwek }} , booktitle={{Proc. Ninth Int'l Conf. Adaptive and Natural Computing Algorithms (ICANNGA '09)}} Ninth Int'l Conf. Adaptive and Natural Computing Algorithms (ICANNGA '09) , year={2009} } @incollection{b26, , title={{Detecting Differentially Expressed Genes by Relative Entropy}} , author={{ XYan }} , journal={{J. Theoretical Biology}} 234 3 , year={2005} } @incollection{b27, , title={{Gene Selection for Classification of Microarray Data Based on the Bayes Error}} , author={{ J.-GZhang } and { H.-WDeng }} , journal={{BMC Bioinformatics}} 8 1 370 , year={2007} } @incollection{b28, , title={{An Entropy-Based Gene Selection Method for Cancer Classification Using Microarray Data}} , author={{ XLiu } and { AKrishnan } and { AMondry }} , journal={{BMC Bioinformatics}} 6 , year={2005} } @incollection{b29, , title={{Not Proper Roc Curves as New Tool for the Analysis of Differentially Expressed Genes in Microarray Experiments}} , author={{ SParodi } and { VPistoia } and { MMuselli }} , journal={{BMC Bioinformatics}} 9 1 410 , year={2008} } @incollection{b30, , title={{Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data}} , author={{ SDudoit } and { JFridlyand } and { TPSpeed }} , journal={{J. Am. Statistical Assoc}} 97 457 , year={2002} } @incollection{b31, , title={{Tissue Classification with Gene Expression Profiles}} , author={{ ABen-Dor }} , journal={{J. Computational Biology}} 7 , year={2000} } @incollection{b32, , author={{ JCohen }} , booktitle={{The Earth is Round (p < .05)}} , year={1994} 38 } @incollection{b33, , title={{A Mixture Model Approach to Detecting Differentially Expressed Genes with Microarray Data}} , author={{ WPan } and { JLin } and { CTLe }} , journal={{Functional and Integrative Genomics}} 3 3 , year={2003} } @incollection{b34, , title={{Multiple Hypothesis Testing in Microarray Experiments}} , author={{ SDudoit } and { JPShaffer } and { JCBoldrick }} , journal={{Statistical Science}} 18 1 , year={2003} } @incollection{b35, , title={{An Efficient and Robust Statistical Modeling Approach to Discover Differentially Expressed Genes Using Genomic Expression Profiles}} , author={{ JGThomas }} , journal={{Genome Research}} 11 7 , year={2001} } @incollection{b36, , title={{Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing}} , author={{ YBenjamini } and { YHochberg }} , journal={{J. Royal Statistical Soc. Series B (Methodological)}} 57 1 , year={1995} } @incollection{b37, , title={{The Positive False Discovery Rate: A Bayesian Interpretation and the q-Value}} , author={{ DStorey }} , journal={{Annals of Statistics}} 31 , year={2003} } @incollection{b38, , title={{A Direct Approach to False Discovery Rates}} , author={{ JDStorey }} , journal={{J. Royal Statistics Soc.: Series B}} 64 3 , year={2002} } @incollection{b39, , title={{New Feature Subset Selection Procedures for Classification of Expression Profiles}} , author={{ TBø } and { IJonassen }} , journal={{Genome Biology}} 4 4 , year={2002} } @incollection{b40, , title={{Microarray Analysis at Single-Molecule Resolution}} , author={{ LeilaMuresan } and { Jaros?awJacak } and { ErichPeterKlement } and { JanHesse } and { GerhardJSchutz }} , journal={{IEEE TRANSACTIONS ON NANOBIOSCIENCE}} 9 1 , year={MARCH 2010} } @incollection{b41, , title={{Estimating Genome-Wide Gene Networks Using Nonparametric Bayesian Network Models on Massively Parallel Computers}} , author={{ YoshinoriTamada } and { SeiyaImoto } and { HiromitsuAraki } and { MasaoNagasaki } and { CristinPrint } and { DStephenCharnock-Jones } and { SatoruMiyano }} , journal={{IEEE TRANSACTIONS ON COMPUTA-TIONAL BIOLOGY AND BIOINFORMA-TICS}} , year={2010} } @incollection{b42, , title={{Incorporating nonlinear relationships in microarray missing value imputation}} , author={{ TianweiYu } and { HesenPeng } and { WeiSun }} , journal={{IEEE TRANSACTIONS ON COMPUT-ATIONAL BIOLOGY AND BIOINFORMATICS}} , year={2010} } @incollection{b43, , title={{A Max-Flow Based Approach to the Identification of Protein Complexes Using Protein Interaction and Microarray Data}} , author={{ JianxingFeng } and { RuiJiang } and { TaoJiang }} , journal={{IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS}} , year={2010} } @incollection{b44, , title={{Probabilistic Models for Semi-Supervised Discriminative Motif Discovery in DNA Sequences}} , author={{ JongKyoung } and { Kim } and { SeungjinChoi } and { Member } and { Ieee }} , journal={{IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS}} , year={FEBRUARY 2, 2010} } @incollection{b45, , title={{Multi-Class Kernel-Imbedded Gaussian Processes for Microarray Data Analysis}} , author={{ XinZhao } and { LeoWang-Kit } and { Cheung }} , journal={{IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFOR-MATICS}} , year={2010} } @incollection{b46, , title={{A cDNA Microarray Gene Expression Data Classifier for Clinical Diagnostics based on Graph Theory}} , author={{ AlfredoBenso } and { StefanoDiIeee Senior Member } and { IeeeCarlo } and { GianfrancoMember } and { Politano }} , journal={{IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS}} , year={2010} } @book{b47, , title={{A Novel Method for Mining Temporally Dependent Association Rules in Three-Dimensional Microarray Datasets}} , author={{ Yu-ChengLiu } and { Chao-HuiLee } and { Wei-ChungChen } and { JWShin } and { Hui-HuangHsu } and { VincentSTseng }} , year={2010} , publisher={IEEE} } @incollection{b48, , title={{Recipe for Uncovering Predictive Genes using Support Vector Machines based on Model Population Analysis}} , author={{ Hong-DongLi } and { Yi-ZengLiang } and { Qing-SongXu } and { Dong-ShengCao } and { Bin-BinTan } and { Bai-ChuanDeng } and { Chen-ChenLin }} , journal={{IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFOR-MATICS}} , year={2010} } @incollection{b49, , title={{Accurate Reconstruction for DNA Sequencing by Hybridization Based on A Constructive Heuristic}} , author={{ YangChen } and { JingluHu }} , journal={{IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS}} , year={2010} } @incollection{b50, , title={{Probabilistic Models for Semi-Supervised Discriminative Motif Discovery in DNA Sequences}} , author={{ JongKyoung } and { Kim } and { SeungjinChoi } and { Member } and { Ieee }} , journal={{IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS}} , year={FEBRUARY 2, 2010} } @incollection{b51, , title={{A mathematical model for the validation of gene selection methods}} , author={{ MarcoMuselli } and { Member } and { AlbertoIeee } and { MarcoBertoni } and { AlessandroFrasca } and { FrancescaBeghini } and { GiorgioRuffino } and { Valentini }} , journal={{IEEE ACM TRANS. ON COMP. BIOL. AND BIOINFORMATICS}} , year={2010} } @incollection{b52, , title={{Microarray Analysis at Single-Molecule Resolution}} , author={{ LeilaMuresan } and { Jaros?awJacak } and { ErichPeterKlement } and { JanHesse } and { GerhardJSchutz }} , journal={{IEEE TRANSACTIONS ON NANOBIOSCIENCE}} 9 1 , year={MARCH 2010} } @incollection{b53, , title={{TCLUST: A fast method for clusterin genome-scale expression data}} , author={{ BanuDost } and { ChunleiWu } and { AndrewSu } and { VineetBafna }} , journal={{IEEE TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMA-TICS}} , year={2010} } @incollection{b54, , title={{True Path Rule hierarchical ensembles for genome-wide gene function prediction}} , author={{ GiorgioValentini }} , journal={{IEEE ACM TRANS. ON COMP. BIOL. AND BIOINFORMATICS}} , year={2010} } @incollection{b55, , title={{Differential Gene Expression Analysis for Diabetes with and without parental history}} , author={{ ChandraSekhar } and { VAllam Appa Rao } and { P. SrinivasaRao }} , booktitle={{InComputer Science and Information Technology (ICCSIT), 2010 3rd IEEE International Conference on}} , publisher={IEEE} , year={2010} 9 } @incollection{b56, , title={{Identification of differentially expressed genes for diabetes with parental history vs healthy using Microarray data analysis}} , author={{ VSekhar } and { Chandra } and { PSAllam Appa Rao } and { KRao } and { Srinivas }} , booktitle={{Advanced Computer Theory and Engineering (ICACTE), 2010 3rd International Conference on}} , publisher={IEEE} , year={2010} 4 } @incollection{b57, , title={{A general framework for analyzing data from two short timeseries microarray experiments}} , author={{ MohakShah } and { JacquesCorbeil }} , journal={{Computational Biology and Bioinformatics}} 8 1 , year={2011} , note={IEEE/ACM Transactions on} } @incollection{b58, , title={{Multiclass Kernel-Imbedded Gaussian Processes for Microarray Data Analysis}} , author={{ XinZhao } and { Leo Wang-KitCheung }} , journal={{IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)}} 8 4 , year={2011} } @incollection{b59, , title={{Investigating the minimum required number of genes for the classification of neuromuscular disease microarray data}} , author={{ ArgirisSakellariou } and { DespinaSanoudou } and { GeorgeSpyrou }} , journal={{Information Technology in Biomedicine}} 15 3 , year={2011} , note={IEEE Transactions on} } @incollection{b60, , title={{Gene Expression Analysis for Type-2 Diabetes Mellitus--A Study on Diabetes With And Without Parental History}} , author={{ ChandraVasamsetty } and { Sekhar } and { Allam AppaSrinivasa Rao Peri } and { KRao } and { ChintaSrinivas } and { Someswararao }} , journal={{Journal of Theoretical & Applied Information Technology}} 27 1 , year={2011} } @incollection{b61, , title={{Gene Expression Analysis for Type-2 Diabetes Mellitus-A Case Study on Healthy vs Diabetes with Parental History}} , author={{ ChandraVasamsetty } and { Sekhar } and { Allam AppaSrinivasa Rao Peri } and { KRao } and { ChintaSrinivas } and { Someswararao }} , journal={{IACSIT International Journal of Engineering and Technology}} 3 3 , year={2011. 2012} , note={IEEE Transactions on} } @incollection{b62, , title={{Identification of Differentially Expressed Genes for Time-Course Microarray Data Based on Modified RM ANOVA}} , author={{ OlaElbakry } and { MOmairAhmad } and { MN SSwamy }} , journal={{Computational Biology and Bioinformatics}} 9 2 , year={2012} , note={IEEE/ACM Transactions on} } @incollection{b63, , title={{A top-r feature selection algorithm for microarray gene expression data}} , author={{ AlokSharma } and { SeiyaImoto } and { SatoruMiyano }} , journal={{IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)}} 9 3 , year={2012} } @incollection{b64, , title={{High-throughput biomarker segmentation on ovarian cancer tissue microarrays via hierarchical normalized cuts}} , author={{ AndrewJanowczyk } and { SharatChandran } and { RajendraSingh } and { DimitraSasaroli } and { GeorgeCoukos } and { MichaelDFeldman } and { AnantMadabhushi }} , journal={{Biomedical Engineering}} 59 5 , year={2012} , note={IEEE Transactions on} } @incollection{b65, , title={{A new measure of classifier performance for gene expression data}} , author={{ BlaiseHanczar } and { AvnerBar-Hen }} , journal={{IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)}} 9 5 , year={2012} } @incollection{b66, , title={{Mutual information-based supervised attribute clustering for microarray sample classification}} , author={{ PradiptaMaji }} , journal={{IEEE Transactions on}} 24 1 , year={2012} , note={Knowledge and Data Engineering} } @incollection{b67, , title={{On modeling and state estimation for genetic regulatory networks with polytopic uncertainties}} , author={{ ZidongWang } and { HuihaiWu } and { JinlingLiang } and { JieCao } and { XiaohuiLiu }} , journal={{IEEE Transactions on}} 12 1 , year={2013} , note={NanoBioscience} } @incollection{b68, , title={{An interactive approach to multiobjective clustering of gene expression patterns}} , author={{ AnirbanMukhopadhyay } and { UjjwalMaulik } and { SanghamitraBandyopadhyay }} , journal={{Biomedical Engineering}} 60 1 , year={2013} , note={IEEE Transactions on} } @incollection{b69, , title={{gene-expression-based cancer subtypes prediction through feature selection and transductive SVM}} , author={{ UjjwalMaulik } and { AnirbanMukhopadhyay } and { DebasisChakraborty }} , journal={{Biomedical Engineering}} 60 4 , year={2013} , note={IEEE Transactions on} } @incollection{b70, , title={{Using the Maximum Between-Class Variance for Automatic Gridding of cDNA Microarray Images}} , author={{ Gui-Shao } and { FanFang } and { QianYang } and { Qi-FengZhang } and { Lin-KaiZhou } and { Luo }} , journal={{Computational Biology and Bioinformatics}} 10 1 , year={2013} , note={IEEE/ACM Transactions on} } @incollection{b71, , title={{Performance analysis and design of position-encoded microsphere arrays using the Ziv-Zakai bound}} , author={{ XiaoxiaoXu } and { PinakiSarder } and { NalinikanthKotagiri } and { SamuelAchilefu } and { AryeNehorai }} , journal={{IEEE Transactions on}} 12 1 , year={2013} , note={NanoBioscience} } @incollection{b72, , title={{Proximity measures for clustering gene expression microarray data: a validation methodology and a comparative analysis}} , author={{ PabloAJaskowiak } and { JgbRicardo } and { IvanGCampello } and { Costa Filho }} , journal={{IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB)}} 10 4 , year={2013} } @incollection{b73, , title={{GENESHIFT: A Nonparametric Approach for Integrating Microarray Gene Expression Data Based on the Inner Product as a Distance Measure between the Distributions of Genes}} , author={{ CosminLazar } and { JonatanTaminau } and { StijnMeganck } and { DavidSteenhoff } and { AlainColetta } and { YWeissDavid } and { ColinSolis } and { RobinMolter } and { HuguesDuque } and { AnnBersini } and { Nowé }} , journal={{IEEE/ACM Transactions on Computational Biology and Bioinformatics}} 10 2 , year={2013} , publisher={TCBB} } @book{b74, , title={{Classification and Immunohistochemical Scoring of Breast Tissue Microarray Spots}} , author={{ Amaral } and { StephenJTelmo } and { KatherineMckenna } and { AlastairRobertson } and { Thompson }} , year={2013} } @book{b75, , title={{TotalPLS: Local Dimension Reduction for Multicategory Microarray Data}} , author={{ WenjieYou } and { ZijiangYang } and { MingshunYuan } and { GuoliJi }} }